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Descriptions are generated automatically from the ICTVdB database including links. Some descriptions are only very basic and links may point to documents that are not yet published on the Web.

03.019.0.01.014.00.193.003. SARS-Coronavirus Sin0409

Cite this publication as: Sara Mullins for ICTVdB Management (2005). 03.019.0.01.014.00.193.003. SARS-Coronavirus Sin0409. In: ICTVdB - The Universal Virus Database, version 3. Büchen-Osmond, C. (Ed), ICTVdB Management, Columbia University, New York, USA

Cite this site as: ICTVdB - The Universal Virus Database, version 3. http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/

Isolation Details

Isolate designation: Sin0409.
Isolation date: Infection most likely occurred in August, 2003; 04 September; 2003.
Location: Singapore; Singapore.
Source of isolate: human.

Virus was isolated by Dr Poh Lian Lim; Department of Infectious Diseases; Tan Tock Seng Hospital; 11 Jalan Tan Tock Seng; 308433; Singapore. Email: pllim@post.harvard.edu. Involved in the submission of the isolate was also Asok Kurup; Department of Medicine, Singapore General Hospital, Singapore; Gowri Gopalakrishna; Ministry of Health, Singapore; Kwai Peng Chan; Department of Pathology, Singapore General Hospital, Singapore.

Reference: Lim, P.L., Kurup, A., Gopalakrishna, G., et. al. (2004) Brief Report: Laboratory-Acquired Severe Acute Respiratory Syndrome. New England Journal of Medicine,.

Classification

This is a description of a vertebrate virus at the isolate level.

ICTVdB Virus Code: 03.019.0.01.014.00.193.003. Virus accession number: SARSI069. Former accession number: 41016613. NCBI Taxonomy ID: [266147].

Biocontainment Level

Distribution of this virus falls under quarantine restrictions. It is recommended to handle this virus at the biocontainment level BSL-3.

Name, Synonyms and Lineage

Virus is assigned to species 03.019.0.01.014. Severe acute respiratory syndrome coronavirus. Virus is assigned to the genus 03.019.0.01. Coronavirus , family 03.019. Coronaviridae , order 03. Nidovirales.

Depositories and Collections

The isolate is unavailable.

Virion Properties

Introduction

Particles contain nucleic acid.

Nucleic Acid

The genome is not segmented and consists of a single molecule of linear, positive-sense, single-stranded RNA. The RNA has been partially sequenced; sequence can be accessed at GenBank with the accession number [AY534758]. The sequenced region is 14011 nucleotides long.

Biological Properties

Natural Host Range

Viral hosts belong to the Domain Eucarya.

Domain Eucarya Kingdom Animalia.

Kingdom Animalia Phylum Chordata.

Phylum Vertebrata Subphylum Vertebrata.

Class Mammalia.

Class Mammalia Order Primates;
Family Hominidae; virus infects Homo sapiens (human).

Host and isolation details Virus was isolated from an adult. Virus was isolated from sputum.

General Symptoms in Animals Infection can affect the respiratory system and hematopoiesis. General symptoms include fever. Signs and symptoms include cough (pulmonary infiltrate in the apical segment of the left lower lobe); leukopenia and thrombocytopenia.

Severity and Occurrence of Disease

Host 1: Infection is apparent and clinically expressed.

Contributor

Data have been submitted online to ICTVdB on 01-12-05 by
Sara Mullins
American Type Culture Collection
George Mason University
PW II, 10801 University Boulevard
Manassas, VA 20110
United States of America
Tel: + 703-365-2700.
Fax: + 703-365-2701.
Email: Sara Mullins.

The description has been generated automatically from DELTA files.

ICTVdB - The Universal Virus Database, developed for the International Committee on Taxonomy of Viruses (ICTV) by Dr Cornelia Büchen-Osmond, is written in DELTA. The virus descriptions in ICTVdB are coded by ICTV members and experts, or by the ICTVdB Management using data provided by the experts, the literature or the latest ICTV Report. The character list is the underlying code. All virus descriptions are based on the character list and natural language translations from the encoded descriptions are automatically generated and formatted for display on the Web.

Developer of the DELTA software: M. J. Dallwitz, T. Paine and E. Zurcher

ICTVdB and DELTA related References

Last updated:15 March 2005 by Cornelia Büchen-Osmond
Web Page generated from ICTVdB by the DELTA systems.

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