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00.057.0.81. Tentative species in thegenus Potyvirus

Table of Contents

Taxonomy

Original Source and History of Virus
Virion Properties


Morphology
Physicochemical and Physical Properties
Nucleic Acid
Proteins
Lipids
Carbohydrates

Genome Organization and Replication

Infectivity
Replication
Function of Helper and Satellite Viruses
Cytopathology

Antigenic Properties

Serological Relationships
Diagnosis

Biological Properties

Symptoms and Host Range
Transmission
Geographic Distribution
Ecology and Control
Diagnostic and Methods

Taxonomic Structure
General Comments
References
Data sources and Contributors
Related Databases
Additional Data Sources and Teaching aids

Taxonomy

Virus Code. 00.057.0.81. Virus Accession number 5701t000.

Virus infects plants.

Description is on taxonomic level of Tentatively in genus (57.0.1. Potyvirus). Virus belongs to the family Totiviridae (VC 75. ).

Properties of Virion

Morphology

Virions not enveloped (32/32). Virions one type of particle only. Nucleocapsids filamentous (49/49); usually straight (1/40), or usually flexuous (39/40); with a clear modal length (38/40), or with clear modal length (2/40); 600-747.7-850 nm long; 12-12.88-15 nm in diameter. Symmetry helical. Axial canal obscure (13/13). Basic helix obvious (2/9), or obscure (7/9). Pitch of helix 3.4 nm.

Physicochemical an Physical Properties

Buoyant density 1.325 g cm-3 in CsCl. One sedimenting component in purified preparations (5/5). Sedimentation coefficient 118-139.6-168 S. A260/A280 ratio 1.22-1.302-1.34. TIP: 50-60.05-75 °C. LIV: 0.6-6.46-20 days. DEP: log10 minus 1-2 (2/25), or 3 (8/25), or 4-5 (7/25), or 6 (5/25).

Nucleic Acid

Virions contain 5.5-5.75-6 % nucleic acid. Virions contain one molecule of (3/3) linear (1/1) positive-sense single stranded (5/5) RNA (5/5).

Total genome length is 9600-10100-10200 nt. The largest segment 10000 nt. NCBI Taxon ID: 39729. Base ratio 23.3 % guanine; 25.5 % adenine; 24.8 % cytosine; 26.3 % uracil. 3' end has a poly (A) tract. 1 virus specified dsRNA species found in infected cells. Size of largest virus specified dsRNA 11.2 kbp.

Proteins

Virions contain 94-94.25-94.5 % protein. One structural virion protein found (8/8). Protein size 27400-32760-41500 Da.

Function of Helper and Satellite Viruses. Virions associated with helper virus, but independent from its functions during replication (1/1).

Cytopathology. Virions found in cytoplasm (13/13), or in nuclei (1/13). Inclusions present in infected cells (24/24). Inclusions are crystals in the cytoplasm (1/25), or crystals in the nucleus (1/25), or amorphous X-bodies (1/25), or viroplasma (1/25), or pinwheels (24/25), or unusual in shape (2/25). They contain virions (1/15), or they do not contain virions (14/15).

Biological Properties

Symptoms and Host Range

Host of virus belongs to the Domain Eucarya. Host of virus belongs to the Kingdom Plantae.

Natural Host Range and Symptoms

Symptoms persist (32/33), or disappear soon after infection (1/33).

Experimental Host Range and Symptoms

Several (3-9) families susceptible (9/35), or few (<3) families susceptible (26/35).

Susceptible Hosts

Experimentally infected species susceptible to virus: Alstroemeria (1), or Amaranthus caudatus (1), or Amaranthus cruentus (1), or Amaranthus dilatum (1), or Amaranthus leucocarpus (1), or Amaranthus lividus (1), or Amaranthus tricolor (1), or Amaranthus viridis (1), or Ammi majus (1), or Anthoxanthum aristatum (1), or Anthoxanthum odoratum (1), or Apium graveolens (3), or Aquilegia (1), or Arachis hypogaea (1), or Avena fatua (1), or Avena sativa (2), or Avena strigosa (3), or Benincasa hispida (1), or Bromus macrostachys (1), or Bromus mollis (2), or Bryonia cretica (1), or Bryonia dioica (1), or Bryonopsis laciniosa (1), or Cajanus cajan (1), or Canavalia maritima (1), or Capsicum annuum (3), or Capsicum frutescens (2), or Cassia occidentalis (1), or Cassia tora (1), or Chenopodium album (3), or Chenopodium amaranticolor (17), or Chenopodium foetidum (1), or Chenopodium murale (4), or Chenopodium quinoa (15), or Chrysanthemum frutescens (1), or Cicer arietinum (1), or Citrullus lanatus (3), or Coriandrum sativum (1), or Crotalaria medicaginea (1), or Cucumis melo (4), or Cucumis sativus (3), or Cucurbita maxima (1), or Cucurbita maxima × C. moschata (1), or Cucurbita moschata (2), or Cucurbita pepo (3), or Cypripedium calceolus (1), or Dactylis glomerata (1), or Datura innoxia (1), or Datura metel (3), or Datura stramonium (7), or Daucus carota (1), or Dioscorea alata (1), or Dioscorea cayenensis (1), or Dioscorea trifida (1), or Dipsacus fullonum (1), or Dryopteris filix-mas (1), or Eucharis grandiflora (1), or Ficus carica (1), or Glycine max (3), or Gomphrena globosa (9), or Habenaria radiata (1), or Helianthus annuus (1), or Holcus lanatus (1), or Holcus mollis (1), or Hordeum vulgare (1), or Hyoscyamus niger (2), or Ipomoea batatas (1), or Ipomoea nil (1), or Ipomoea setosa (1), or Isachne globosa (1), or Lagenaria leucantha (1), or Lagurus ovatus (2), or Lamarckia aurea (1), or Lathyrus odoratus (1), or Launaea aspleniifolia (1), or Launaea naudicaulis (1), or Lens culinaris (1), or Lolium multiflorum (2), or Lolium perenne (1), or Luffa cylindrica (1), or Lycopersicon esculentum (6), or Macroptilium lathyroides (1), or Malva parviflora (1), or Medicago sativa (1), or Melilotus indicus (1), or Melothria liukiuensis (1), or Momordica charantia (1), or Narcissus pseudonarcissus (1), or Narcissus tazetta (1), or Nerine sarniensis (1), or Nicandra physalodes (1), or Nicotiana benthamiana (7), or Nicotiana clevelandii (7), or Nicotiana debneyi (3), or Nicotiana glutinosa (9), or Nicotiana hesperis (1), or Nicotiana megalosiphon (5), or Nicotiana occidentalis (3), or Nicotiana rustica (5), or Nicotiana sylvestris (3), or Nicotiana tabacum (9), or Nothoscordum fragrans (1), or Oxalis regnellii (1), or Paspalum membranaceum (1), or Passiflora edulis (1), or Passiflora foetida (1), or Passiflora mollissima (1), or Pecteilis (1), or Perilla frutescens (1), or Petroselinum crispum (2), or Petunia alba (1), or Petunia × hybrida (7), or Phalaris arundinacea (1), or Phalaris paradoxa (2), or Phaseolus acutifolius (1), or Phaseolus lunatus (2), or Phaseolus vulgaris (9), or Physalis floridana (4), or Physalis peruviana (2), or Pimpinella anisum (1), or Plantago lanceolata (1), or Pleioblastus chino (1), or Polypodium vulgare (1), or Populus grandidenta (1), or Populus tremuloides (1), or Populus × canadensis (1), or Primula malacoides (1), or Rubus rigidus (1), or Rumex (1), or Rumex conglomeratus (1), or Rumex obtusifolius (1), or Rumex patientia (1), or Rumex pulcher (1), or Scabiosa atropurpurea (1), or Sesamum indicum (1), or Setaria macrostachya (1), or Setaria viridis (1), or Solanum melongena (2), or Solanum nigrum (1), or Solanum tuberosum (1), or Spinacia oleracea (3), or Tetragonia tetragonioides (3), or Trichosanthes anguina (1), or Trichosanthes rostrata (1), or Trigonella foenum-graecum (1), or Triticum aestivum (1), or Verbena hybrida (1), or Vicia faba (3), or Vigna angularis (1), or Vigna radiata (2), or Vigna unguiculata (5), or Vigna unguiculata ssp. sesquipedalis (1), or Washingtonia robusta (1), or Zinnia elegans (1), or Zoysia (1).

Insusceptible Hosts

Species inoculated with virus, but tested not to be susceptible: Abelmoschus esculentus (1/28), or Ageratum conyzoides (1/28), or Allium cepa (1/28), or Amaranthus caudatus (1/28), or Antirrhinum majus (1/28), or Apium graveolens (1/28), or Arachis hypogaea (4/28), or Avena byzantina (1/28), or Avena sativa (3/28), or Beta vulgaris (7/28), or Brassica campestris ssp. chinensis (1/28), or Brassica campestris ssp. napus (1/28), or Brassica campestris ssp. pekinensis (1/28), or Brassica campestris ssp. rapa (1/28), or Brassica juncea (2/28), or Brassica oleracea var. botrytis (2/28), or Brassica oleracea var. capitata (4/28), or Cajanus cajan (1/28), or Calendula officinalis (2/28), or Capsicum annuum (9/28), or Capsicum frutescens (2/28), or Cassia occidentalis (4/28), or Catharanthus roseus (2/28), or Celosia cristata (1/28), or Chenopodium album (2/28), or Chenopodium amaranticolor (7/28), or Chenopodium ambrosioides (1/28), or Chenopodium capitatum (2/28), or Chenopodium murale (6/28), or Chenopodium quinoa (7/28), or Chrysanthemum morifolium (1/28), or Conium maculatum (1/28), or Cucumis melo (2/28), or Cucumis metuliferus (1/28), or Cucumis sativus (17/28), or Cucurbita moschata (1/28), or Cucurbita pepo (4/28), or Cyamopsis tetragonoloba (3/28), or Dactylis glomerata (1/28), or Dahlia pinnata (1/28), or Datura metel (3/28), or Datura stramonium (11/28), or Daucus carota (1/28), or Dianthus caryophyllus (2/28), or Festuca pratensis (1/28), or Glycine max (4/28), or Gomphrena globosa (7/28), or Helianthus annuus (2/28), or Hordeum vulgare (1/28), or Lablab purpureus (2/28), or Lactuca sativa (3/28), or Lens culinaris (1/28), or Lilium formosanum (1/28), or Lolium perenne (1/28), or Luffa acutangula (2/28), or Lycopersicon esculentum (8/28), or Medicago sativa (4/28), or Momordica balsamina (1/28), or Nicandra physalodes (3/28), or Nicotiana clevelandii (2/28), or Nicotiana debneyi (3/28), or Nicotiana glutinosa (11/28), or Nicotiana megalosiphon (2/28), or Nicotiana rustica (5/28), or Nicotiana sylvestris (1/28), or Nicotiana tabacum (12/28), or Ocimum basilicum (1/28), or Passiflora edulis (1/28), or Passiflora suberosa (1/28), or Petunia × hybrida (6/28), or Phaseolus lunatus (1/28), or Phaseolus vulgaris (7/28), or Phleum pratense (1/28), or Phlox drummondii (1/28), or Physalis floridana (4/28), or Pisum sativum (8/28), or Raphanus sativus (3/28), or Salvia splendens (1/28), or Sesamum indicum (1/28), or Solanum demissum × S. tuberosum (1/28), or Solanum melongena (4/28), or Solanum nigrum (4/28), or Solanum tuberosum (2/28), or Sonchus oleraceus (2/28), or Sorghum bicolor (1/28), or Spinacia oleracea (5/28), or Tetragonia tetragonioides (4/28), or Trifolium incarnatum (1/28), or Trifolium pratense (3/28), or Trifolium repens (4/28), or Trifolium subterraneum (1/28), or Triticum aestivum (1/28), or Tropaeolum majus (1/28), or Vicia faba (3/28), or Vicia villosa (1/28), or Vigna angularis (1/28), or Vigna radiata (2/28), or Vigna unguiculata (12/28), or Vigna unguiculata ssp. cylindrica (2/28), or Vigna unguiculata ssp. sesquipedalis (1/28), or Zea mays (4/28), or Zinnia elegans (4/28).

Families containing susceptible hosts: Alliaceae (1), or Alstroemeriaceae (1), or Amaranthaceae (9), or Amaryllidaceae (4), or Aspidiaceae (1), or Chenopodiaceae (19), or Compositae (4), or Convolvulaceae (1), or Cucurbitaceae (6), or Cypripediaceae (1), or Dioscoreaceae (1), or Dipsacaceae (1), or Gramineae (7), or Labiatae (1), or Leguminosae-Caesalpinioideae (1), or Leguminosae-Papilionoideae (13), or Malvaceae (1), or Moraceae (1), or Orchidaceae (2), or Oxalidaceae (1), or Palmae (1), or Passifloraceae (1), or Pedaliaceae (1), or Plantaginaceae (1), or Polygonaceae (1), or Polypodiaceae (1), or Primulaceae (1), or Ranunculaceae (1), or Rosaceae (1), or Salicaceae (1), or Solanaceae (23), or Tetragoniaceae (3), or Umbelliferae (3), or Verbenaceae (1).

Families containing insusceptible hosts: Alliaceae (1/28), or Amaranthaceae (8/28), or Apocynaceae (2/28), or Caryophyllaceae (2/28), or Chenopodiaceae (18/28), or Compositae (8/28), or Cruciferae (6/28), or Cucurbitaceae (18/28), or Gramineae (6/28), or Labiatae (2/28), or Leguminosae-Caesalpinioideae (4/28), or Leguminosae-Papilionoideae (17/28), or Liliaceae (1/28), or Malvaceae (1/28), or Passifloraceae (2/28), or Pedaliaceae (1/28), or Polemoniaceae (1/28), or Scrophulariaceae (1/28), or Solanaceae (24/28), or Tetragoniaceae (4/28), or Tropaeolaceae (1/28), or Umbelliferae (2/28).

Transmission

Transmitted by a vector (27/27). Virus transmitted by mechanical inoculation (35/37), or not transmitted by mechanical inoculation (2/37); transmitted by grafting (6/6); not transmitted by contact between plants (2/2); transmitted by seed (1/8), or not transmitted by seed (7/8); not transmitted by pollen (1/1). Transmitted by an insect (27/27); Aphididae (27/27). Transmitted in a non-persistent manner (19/19). Virus lost by the vector when it moults (2/2); does not multiply in the vector (1/1); not transmitted congenitally to the progeny of the vector (1/1).

Geographic Distribution

Geographical distribution probably restricted (1/1). Spreads in the Central Asian region (1/8), or the Eastern Asian region (3/8), or the Eurasian region (3/8), or the Middle East (1/8). Spreads in Australia (1/45), or Brazil (1/45), or Canada (1/45), or China (1/45), or the former Czechoslovakia (1/45), or Germany (1/45), or Guadeloupe (1/45), or Hungary (2/45), or India (6/45), or Italy (3/45), or Japan (9/45), or Korea D.P.R. (North) (1/45), or Korea Republic (1/45), or Malaysia (1/45), or Morocco (1/45), or New Zealand (2/45), or Nigeria (1/45), or the Philippines (1/45), or Puerto Rico (1/45), or Taiwan (4/45), or Thailand (1/45), or the UK (5/45), or the USA (7/45), or Venezuela (1/45), or Yemen (1/45), or the former Yugoslavia (1/45).

Diagnostic and Methods

Leaf sap contains few virions (9/11), or contains many virions (2/11).

Taxonomic Structure

Species: Aphid-borne (*aphid transmission not confirmed; +name inadequate but denotes plant species with a report of a potyvirus infection): 00.057.0.81.001 Alstroemeria streak virus; 00.057.0.81.002 Amazon lily mosaic virus; 00.057.0.81.003 Aneilema virus+; 00.057.0.81.004 Anthoxanthum mosaic virus*; 00.057.0.81.005 Aquilegia virus*+; 00.057.0.81.006 Arracacha virus Y; 00.057.0.81.007 Asystasia gangetica mottle virus*; 00.057.0.81.008 bidens mosaic virus; 00.057.0.81.009 bramble yellow mosaic virus; 00.057.0.81.010 brandle yellow mosaic virus; 00.057.0.81.011 Bryonia mottle virus; 00.057.0.81.012 canary reed mosaic virus; 00.057.0.81.013 Canavalia maritima mosaic virus; 00.057.0.81.014 carrot mosaic virus; 00.057.0.81.015 Cassia yellow spot virus; 00.057.0.81.016 celery yellow mosaic virus; 00.057.0.81.017 chickpea bushy dwarf virus; 00.057.0.81.018 chickpea filiform virus; 00.057.0.81.019 Clitoria yellow mosaic virus; 00.057.0.81.020 cowpea rugose mosaic virus; 00.057.0.81.021 Crinum mosaic virus*; 00.057.0.81.022 Croatian clover virus+; 00.057.0.81.023 Cypripedium calceolus virus*; 00.057.0.81.024 Daphne virus Y; 00.057.0.81.025 datura virus 437 00.057.0.81.026 Datura distortion mosaic virus; 00.057.0.81.027 Datura mosaic virus*; 00.057.0.81.028 Datura necrosis virus; 00.057.0.81.029 Desmodium mosaic virus; 00.057.0.81.030 Dioscorea alata ring mottle virus; 00.057.0.81.031 Dioscorea trifida virus+; 00.057.0.81.032 Dipladenia mosaic virus; 00.057.0.81.033 dock mottling mosaic virus; 00.057.0.81.034 eggplant green mosaic virus; 00.057.0.81.035 eggplant severe mottle virus; 00.057.0.81.036 Euphorbia ringspot virus; 00.057.0.81.037 Ficus carica virus+; 00.057.0.81.038 Freesia mosaic virus; 00.057.0.81.039 garlic yellow streak virus; 00.057.0.81.040 guar symptomless virus*; 00.057.0.81.041 Habenaria mosaic virus; 00.057.0.81.042 Holcus streak virus*; 00.057.0.81.043 Hungarian datura innoxia virus*; 00.057.0.81.044 hyacinth mosaic virus*; 00.057.0.81.045 Indian pepper mottle virus; 00.057.0.81.046 isachne mosaic virus*; 00.057.0.81.047 Kennedya virus Y; 00.057.0.81.048 lily mild mottle virus; 00.057.0.81.049 Malva vein clearing virus; 00.057.0.81.050 marigold mottle virus; 00.057.0.81.051 Melilotus mosaic virus; 00.057.0.81.052 melon vein-banding mosaic virus; 00.057.0.81.053 Moroccan watermelon mosaic virus; 00.057.0.81.054 mungbean mosaic virus*; 00.057.0.81.055 mungbean mottle virus; 00.057.0.81.056 Narcissus late season yellows virus, syn. jonquil mild mosaic virus; 00.057.0.81.058 Nasturtium mosaic virus; 00.057.0.81.059 nerine virus*+; 00.057.0.81.060 palm mosaic virus*; 00.057.0.81.061 papaya leaf distortion mosaic virus; 00.057.0.81.062 passionfruit mottle virus; 00.057.0.81.063 passionfruit ringspot virus; 00.057.0.81.064 patchouli mottle virus; 00.057.0.81.065 peanut green mottle virus; 00.057.0.81.066 peanut mosaic virus; 00.057.0.81.067 Pecteilis mosaic virus; 00.057.0.81.068 pepper mild mosaic virus; 00.057.0.81.069 Perilla mottle virus; 00.057.0.81.070 plantain virus 7; 00.057.0.81.071 Pleioblastus mosaic virus; 00.057.0.81.072 Populus virus*; 00.057.0.81.073 Primula mosaic virus; 00.057.0.81.074 Primula mottle virus; 00.057.0.81.075 Ranunculus mottle virus; 00.057.0.81.076 Sri Lankan passionfruit mottle virus; 00.057.0.81.077 sunflower mosaic virus*; 00.057.0.81.078 sweet potato latent virus; 00.057.0.81.079 sweet potato vein mosaic virus; 00.057.0.81.080 sword bean distortion mosaic virus; 00.057.0.81.081 teasel mosaic virus; 00.057.0.81.082 tobacco vein banding mosaic virus; 00.057.0.81.083 tobacco wilt virus; 00.057.0.81.084 Tongan vanilla virus; 00.057.0.81.085 Tradescantia/Zebrina virus+; 00.057.0.81.086 Trichosanthes mottle virus; 00.057.0.81.087 Tropaeolum virus 1; 00.057.0.81.088 Tropaeolum virus 2; 00.057.0.81.089 Ullucus mosaic virus; 00.057.0.81.090 Vallota mosaic virus; 00.057.0.81.091 vanilla mosaic virus; 00.057.0.81.092 white bryony virus; 00.057.0.81.093 wild potato mosaic virus; 00.057.0.81.094 Zoysia mosaic virus.
The plant virus database VIDE is also listing the following species: 00.057.0.91.001 broad bean virus Y; 00.057.0.91.002 Brinjal mild mosaic virus; 00.057.0.91.003 celery latent virus; 00.057.0.91.004 endive necrotic mosaic; 00.057.0.91.005 fern virus; 00.057.0.91.006 Kalanchoe mosaic virus, 00.057.0.91.007 Launaea mosaic virus; 00.057.0.91.008 Melothria mottle virus; 00.057.0.91.009 Nerine virus Y; 00.057.0.91.010 parsley green mottle virus; 00.057.0.91.011 peanut top paralysis virus; 00.057.0.91.012 shallot yellow stripe virus; 00.057.0.91.013 shamrock chlorotic ringspot virus; 00.057.0.91.014 soybean virus Z; 00.057.0.91.015 tomato mild mottle virus; 00.057.0.91.016 Zinnia mild mottle virus.

References

The following references are cited in the Sixth ICTV Report: rf_potyv.htm.

Data sources and contributors.

The above description has been compiled from the data presented in the Sixth ICTV Report by Barnett OW, Adam G, Brunt AA, Dijkstra J, Dougherty WG, Edwardson JR, Goldbach R, Hammond J, Hill JH, Jordan RL, Kashiwazaki S, Lommel SA, Makkouk K, Morales FJ, Ohki ST, Purcifull D, Shikata E, Shukla DD, Uyeda I.

The description has been generated automatically from DELTA files.

ICTVdB - The Universal Virus Database, developed for the International Committee on Taxonomy of Viruses (ICTV) by Dr Cornelia Büchen-Osmond, is written in DELTA. The virus descriptions in ICTVdB are coded by ICTV members and experts, or by the ICTVdB Management using data provided by the experts, the literature or the latest ICTV Report. The character list is the underlying code. All virus descriptions are based on the character list and natural language translations from the encoded descriptions are automatically generated and formatted for display on the Web.

Developer of the DELTA software: M. J. Dallwitz, T. Paine and E. Zurcher

ICTVdB and DELTA related References

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Last updated: 15 June 2004 by Cornelia Büchen-Osmond
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