Cite this publication as: ICTVdB Management (2006). 00.056.0.01.001. Potato virus X. In: ICTVdB - The Universal Virus Database, version 4. Büchen-Osmond, C. (Ed), Columbia University, New York, USA
Cite this site as: ICTVdB - The Universal Virus Database, version 4. http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/
Host of Isolate and Habitat Details
Source of
isolate: Solanum tuberosum.
Natural host and symptoms
Solanum tuberosum symptoms vary,
some strains symptomless, others induce necrotic streaks.
Brassica campestris ssp. rapa mild mosaic mottling and distortion of leaves, plant stunting.
Reference to Isolation Report
Smith (1931).
ICTVdB Virus Code: 00.056.0.01.001. Virus accession number:
56001001. Obsolete virus code: 56.0.1.0.001; superceded accession number:
56010001.
NCBI Taxon Identifier NCBI Taxonomy ID:
12183.
Electron microscopic preparation and references: Virus preparation contains many virions. Reference for electron microscopic methods: Francki and McLean (1968).
M31541 Em(40)_vi:PVXKPA Gb(84)_vi:PVXKPA Potato virus X 166K RNA, complete cds; 24K RNA, complete cds; 12K RNA, complete cds; 8K RNA,
M38480 Em(40)_vi:PVXGEN Gb(84)_vi:PVXGEN Potato virus X complete genome. 3/92 6,436bp.
M38655 Em(40)_vi:PVXCT23 Gb(84)_vi:PVXCT23 Potato Virus X coat protein gene, complete cds. 10/90 861bp.
M63141 Em(40)_vi:PVXCGA1 Gb(84)_vi:PVXCGA Potato virus X complete genome. 2/92 6,432bp.
M72416 Em(40)_vi:PVXCG Gb(84)_vi:PVXCG Potato virus X complete genome. 10/93 7,568bp.
M95516 Em(40)_vi:PVXCOPR Gb(84)_vi:PVXCOPR Potato virus X mRNA, complete cds. 6/92 6,435bp.
X05198 Em(40)_vi:POPVX3 Gb(84)_vi:POPVX3 Potato virus X genome. 10/93 6,435bp.
X12804 Em(40)_vi:PVXCOAT Gb(84)_vi:PVXCOAT Potato Virus X (PVX) mRNA for viral coat protein. 9/93 1,106bp.
X55802 Em(40)_vi:POPOVX Gb(84)_vi:POPOVX Potato Virus X complete genomic RNA. 4/92 6,432bp.
X62442 Em(40)_vi:PVXANPII Gb(84)_vi:PVXANPII Potato virus X artificial neomycin phosphotransferase II mRNA 5'-flank (SEQ1). 9/92 115bp.
X62443 Em(40)_vi:PVXANPTII Gb(84)_vi:PVXANPTII Potato virus X artificial neomycin phosphotransferase II mRNA 5'-flank (SEQ2). 9/92 88bp.
X62444 Em(40)_vi:PVXANPT Gb(84)_vi:PVXANPT Potato virus X artificial neomycin phosphotransferase II mRNA 5'-flank (SEQ3). 9/92 62bp.
X62445 Em(40)_vi:PVXANPTR Gb(84)_vi:PVXANPTR Potato virus X artificial neomycin phosphotransferase II mRNA 5'-flank (SEQ4). 9/92 92bp.
X65015 Em(40)_vi:PVXCP Gb(84)_vi:PVXCP Potato Virus X genomic RNA for coat protein. 6/92 789bp
X72214 Em(40)_vi:PVXHBRNA Gb(84)_vi:PVXHBRNA Potato Virus X strain HB RNA. 11/93 6,432bp.
X88781 Em(44)n:Pvxcpdy Gb(90)_vi:Pvxcpdy Potato virus X coat protein gene, DY strain. 6/95 744bp.
X88782 Em(44)n:Pvxcpex Gb(90)_vi:Pvxcpex Potato virus X coat protein gene, EX strain. 6/95 744bp.
X88783 Em(44)n:Pvxcpkp Gb(90)_vi:Pvxcpkp Potato virus X coat protein gene, KP strain. 6/95 711bp.
X88784 Em(44)n:Pvxcpnl1 Gb(90)_vi:Pvxcpnl1 Potato virus X coat protein gene, Nl1 strain. 6/95 711bp.
X88785 Em(44)n:Pvxcpnl4 Gb(90)_vi:Pvxcpnl4 Potato virus X coat protein gene, Nl4 strain. 6/95 744bp.
X88786 Em(44)n:Pvxcpws2 Gb(90)_vi:Pvxcpws2 Potato virus X coat protein gene, WS2 strain. 6/95 708bp.
X88787 Em(44)n:Pvxcpxa Gb(90)_vi:Pvxcpxa Potato virus X coat protein gene, XA strain. 6/95 711bp.
X88788 Em(44)n:Pvxcpxs Gb(90)_vi:Pvxcpxs Potato virus X coat protein gene, XS strain. 6/95 711bp.
Z23256 Em(40)_vi:PVCOAPRA Gb(84)_vi:PVCOAPRA Potato virus X coat protein RNA and 3 ORF's, complete CDS's. 12/93 6,433bp.
Z29333 Em(40)_vi:PVX8KCP1 Gb(84)_vi:PVX8KCP1 Potato virus X (P551) mRNA for 8K protein and coat protein. 1/94 877bp.
Z29334 Em(40)_vi:PVX8KCP2 Gb(84)_vi:PVX8KCP2 Potato virus X (CP2) mRNA for 8K protein and coat protein. 1/94 874bp.
Z29335 Em(40)_vi:PVX8KCP3 Gb(84)_vi:PVX8KCP3 Potato virus X (S6111) mRNA for 8K protein and coat protein. 1/94 873bp.
Z34261 Gb(84)_vi:PVXCPG Potato virus X (MS) coat protein gene. 6/94 711bp.
M27662 Em(43)_vi:Pvxorf Gb(89)_vi:Pvxorf Potatovirus X (clone pX 1) gene fragment, encoding a partial ORF. 1/95 502bp.
U19790 Gb(89)n:Pvu19790 Potato virus X coat protein mRNA, complete cds. 6/95 789bp. The genome has a base ratio of 22 % guanine; 32 % adenine; 24 % cytosine; 22 % uracil. The 5'-end of the genome has a methylated nucleotide cap; cap sequence type is m7GpppA. The 3'-terminus has a poly (A) tract.
GenBank records for nucleotide sequences; complete genome sequences.
The viral genome encodes structural proteins and non-structural proteins. Virions consist of 1 structural protein(s).
Structural Proteins: Reference to amino acid sequence or composition Shaw and Larson (1962, Shaw et al. (1962, Miki and Knight (1968).
Transcription: The virus codes for 5 ORF(s).
Coding Strategy of Segment 1: Sequence has a gene block. Sequence has triple gene block sequence (TGB). Encodes proteins involved in cell to cell movement.
Domain
Viral hosts belong to the Domain
Eucarya.
Domain Eucarya
Kingdom Plantae.
Kingdom Plantae
Phylum Magnoliophyta
(Angiosperms, Class Magnoliopsida (Dicotyledonae).
Class Magnoliopsida (Dicotyledonae)
Subclass
ASTERIDAE.
Datura stramonium systemic chlorotic rings, then mosaic and mottling.
Nicotiana tabacum systemic ringspot or mottle.
Some strains symptomless at high glasshouse temperatures.
Histopathology: Virus can be best detected in mesophyll and less frequently in the epidermis. Virions are found in the cytoplasm.
Cytopathology: Inclusions are mainly near the nucleus present in infected cells. Cytoplasmic inclusions are amorphous X-bodies (Kozar and Sheludko, 1969). Inclusions contain mature virions.
Bercks, R, (1970). CMI/AAB Descr. Pl. Viruses No. 4, 4 pp.
Brandes, J. (1964). Mitt. biol. BundesAnst. Land. Forstw. 110: 130.
Dolya, V.V., Grama, D.P., Morozov, S.Y. and Atabekov, JG (1987). FEBS Lett. 214: 308.
Francki, RIB. and McLean, G. (1968). Aust. J. biol. Sci. 21: 1311.
Hussman, M.J., Linthorst, H.J.M., Bol. J.F. and Cornellisen, B.J.C. (1988). J. gen. Virol. 69: 1789.
Knight, CA (1963). Protoplasmatologia 4: 177.
Koenig, R. and Lesemann, D.-E. (1989). CMI/AAB Descr. Pl. Viruses No. 354, 5 pp.
Kozar, I.E. and Sheludko, Y.M. (1969). Virology 38: 220.
Miki, T. and Knight, CA (1968). Virology 36: 168.
Morozov, S.Y., Miroshnichenko, N.A., Solovyev, AG., Fedorkin, O.N., Zelenina, D.A., Lukasheva, L.I., Karasev, AV., Dolya, V.V. and Atabekov, JG (1991). J. gen. Virol. 72: 2039.
Paul, H.L. (1959). Arch. Microbiol. 32: 416.
Samad, A, Naqvi, Q.A., Garg, I.D. and Thouvenel, J.-C. (1991). J. Phytopath. 133: 65.
Shaw, JG and Larson, RH (1962). Phytopathology 52: 170.
Shaw, JG, Reichmann, M.E. and Hatt, DL (1962). Virology 18: 79.
Skryabin, K.G., Morozov, S.Y., Kraev, AS., Rozanov, M.V., Chernov, B.K., Lukasheva, L.I. and Atabekov, JG (1988). FEBS Lett. 240: 33.
Smith, K.M. (1931). Proc. R. Soc. 109: 251.
Varma, A, Gibbs, AJ., Woods, R.D. and Finch, JT (1968). J. gen. Virol. 2: 107.
Tomashevskaya, O.L., Solvyev, AG., Karpova, O.V., Fedorkin, O.N., Rodionova, N.P., Morozov, S.Y. and Atabekov, JG (1993). J. gen. Virol. 74: 2717.
Wilson, H.R. and Tollin, P. (1969). J. gen. Virol. 5: 151.
Wodnar-Filipowicz, A, Skizeczkowski, L.J. and Filipowicz, W. (1990). FEBS Lett. 109: 151.
The following generic references are cited in the most recent ICTV Report.
VIDEdB, the plant virus database developed at the Australian National University by Adrian J. Gibbs and collaborators, contains an earlier description with the number 651 by C. Büchen-Osmond, 1987.
A description of the virus is found in DPV, a database for plant viruses developed by the Association of Applied Biologists (AAB), with the number 4.
| | The description has been generated automatically from DELTA files. | |
ICTVdB - The Universal Virus Database, developed for the International Committee on Taxonomy of Viruses (ICTV) by Dr Cornelia Büchen-Osmond, is written in DELTA. The virus descriptions in ICTVdB are coded by ICTV members and experts, or by the ICTVdB Management using data provided by the experts, the literature or the latest ICTV Report. The character list is the underlying code. All virus descriptions are based on the character list and natural language translations from the encoded descriptions are automatically generated and formatted for display on the Web.
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